科创中国

Genealogy and phylogeography of Cyprinid fish Labeo rohita (Hamilton, 1822) inferred from ATPase 6 and 8 mitochondrial DNA gene analysis

原文链接：万方

• 作者：

  Rupesh K. LUHARIYA,Kuldeep K. LAL,Rajeev K. SINGH,Vindhya MOHINDRA,Arti GUPTA,Prachi MASIH,Arvind K. DWIVEDI,Rakhi DAS,U. K. CHAUHAN,J. K. JENA

• 摘要：

  ATPase?6/8?gene?(842?bp)?of?mitochondrial?DNA?was?sequenced?in?Labeo?rohita?samples?(n?=?253)?collected?from?nine?rivers?belonging?to?four?river?basins;?Indus,?Ganges,?Brahmaputra?and?Mahanadi.?Analysis?revealed?44?haplotypes?with?high?haplotype?diversity?(Hd)?0.694?and?low?nucleotide?diversity?(π)?0.001.?The?within?population?variation?was?larger?(83.44%)?than?among?population?differences?(16.56%).?The?mean?Fsv?value?(0.166;?P?〈?0.05)?for?overall?populations?revealed?moderate?level?of?genetic?structuring?in?the?wild?L.?rohita?populations.?The?haplotype?network?presented?a?single?clade?for?wild?L.?rohita?population,?from?different?rivers.?Negative?values?for?Fu's?index?(Fs),?mismatch?distribution?analysis?indicated?period?of?expansion?in?L.?rohita?population.?The?time?after?recent?expansion?was?estimated?for?each?population,?between?0.042?to?0.167?mya.?The?pattern?of?Isolation?by?Distance?(IBD)?was?not?significant?(r?=?-0.113,?P?〈?0.287),?when?all?the?sampling?locations?were?compared?(Mantel?test),?however,?when?an?outlier?(Indus,?Brahmaputra?and?Mahanadi)?was?removed?from?the?whole?population?set,?a?clear?positive?correlation?between?pairwise?Fsv?and?geographic?distance?(Km)?was?seen.?The?analysis?of?data?demonstrated?that?ATPase6/8?gene?polymorphism?is?a?potential?marker?to?understand?genetic?population?structure?of?wild?L.?rohita?existing?in?different?rivers.?The?study?identified?population?substructure?in?wild?L.?rohita?with?common?ancestral?origin?[Current?Zoology?60?(4):?460--471,?2014].

• 关键词：

  线粒体DNA 系统地理学 基因分析 ATP酶 野鲮 鲤科鱼类 南亚 家谱

• 作者单位：

  National Bureau ofFish Genetic Resources (ICAR), Lucknow- 226 002, UP, India%School of Environmental Sciences, APS University, Rewa- 486 003, MP, India

• 基金项目：

  Acknowledgements The present work is the part of the project entitled," Outreach Activity on Fish Genetic Stocks," funded by Indian Council of Agricultural Research, Department of Agricultural Research and Education, Government of India, New Delhi. The authors are thankful to Director, National Bureau of Fish Genetic Resources (NBFGR), Lucknow for facilitating the work.

• 来源期刊：

  动物学报(英文版)

• 年，卷(期)：

  2014004